CDS

Accession Number TCMCG006C121392
gbkey CDS
Protein Id XP_013641605.1
Location complement(join(8729201..8729644,8729739..8731307))
Gene LOC106346735
GeneID 106346735
Organism Brassica napus

Protein

Length 670aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013786151.2
Definition trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category G
Description rhamnose biosynthesis 1
KEGG_TC -
KEGG_Module -
KEGG_Reaction R00293        [VIEW IN KEGG]
KEGG_rclass RC00402        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K12450        [VIEW IN KEGG]
EC 4.2.1.76        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00520        [VIEW IN KEGG]
map00520        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009225        [VIEW IN EMBL-EBI]
GO:0009226        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009812        [VIEW IN EMBL-EBI]
GO:0009813        [VIEW IN EMBL-EBI]
GO:0009914        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010253        [VIEW IN EMBL-EBI]
GO:0010280        [VIEW IN EMBL-EBI]
GO:0010315        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0010928        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016836        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033478        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046148        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050377        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051552        [VIEW IN EMBL-EBI]
GO:0051553        [VIEW IN EMBL-EBI]
GO:0051554        [VIEW IN EMBL-EBI]
GO:0051555        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0060918        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]
GO:1901617        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTCTTCATACACTCCCAAGAACATTCTAATCACCGGAGCAGCCGGTTTCATCGCCTCGCACGTCGCCAACCGGCTCATCCGAACCTACCCGGACTACAAGATCGTCGTCCTCGACAAGCTCGACTACTGCTCCAACCTCAAGAACCTCAACCCCTCCAAGCACTCCCCCAACTTCAAGTTCGTCAAGGGCGACATCGCCAGCGCCGACCTCGTCAACTACCTCCTCATCACCGAACGCATCGACACCATCATGCACTTCGCCGCCCAGACTCACGTCGACAACTCCTTCGGCAACTCCTTCGAGTTCACCAAGAACAACATCTACGGCACCCACGTCCTCCTCGAGGCCTGTAAAGTCACTGGCCAGATCCGGCGGTTTATCCACGTCAGCACTGACGAGGTCTACGGCGAGACTGATGAGGATGCTGTTGTTGGCAACCACGAGGCTTCTCAGCTTCTCCCCACGAATCCTTACTCCGCTACCAAGGCCGGAGCTGAGATGCTTGTGATGGCGTATGGGAGATCGTACGGGCTTCCGGTTATCACCACGCGTGGGAATAATGTTTATGGGCCTAACCAGTTTCCGGAGAAGCTGATTCCTAAGTTTATGTTGCTGGCGATGAGGGGGAAGGTTCTTCCTATTCATGGAGATGGGAGTAATGTTCGTAGCTATCTTTACTGTGAAGATGTTGCTGAGGCGTTTGAGGTTATTCTTCACAAGGGGGAAGTGGGACATGTTTATAATATTGGTACTAAGAAGGAGAGGAGGGTGAATGATGTTGCGCAAGATATCTGCAAGCTCTTTAACGTGGACCCTGAGGCTAACATCAAGTTTGTGGAGAACAGGCCTTTTAACGACCAGAGGTACTTTTTAGATGATGAGAAGCTTAAGATCTTGGGATGGTCGGAGAGGACCACTTGGGAAGAAGGGTTGAAGAAGACGATGGAGTGGTACACGCAGAACCCGGATTGGTGGGGTGATGTTTCTGGAGCGTTGCTTCCCCACCCGAGGATGCTGGTGATGCCTGGTGGGAGACACTTTGATGGGTCTGAAGAGAACTCTGGAGCAGTCGCTTTGTCTGGAAACTCAAGCCAGAGCCAGATGGTGGTTCCTACACCCAGAAGCAGTGGCTCCACTCAGAACCCTTCACTGAAATTCTTGATATATGGTAAGACAGGATGGATTGGGGGATTGCTTGGGCAGATTTGTGAGAAGCAGGGTATTGCTTTTGAGTATGGGAAAGGGCGGCTTGAGGATCGGTCATCCCTCTTGCAAGATATTCTGACTGTTAAGCCTACCCATGTCTTCAATGCTGCTGGTGTGACAGGGAGACCCAATGTCGACTGGTGCGAGTCTCACAAAACTGAGACAATCCGTGCCAATGTTGCAGGCACTTTGACTCTGGCTGATGTCTGCAGAGAGCACAGCCTCCTGTTGATGAACTTTGCTACTGGTTGTATATTCGAGTACGACGAAAACCATCCGCTAGGTTCAGGCATTGGCTTCAAAGAAGAAGACACACCAAACTTCACTGGTTCTTTCTACTCAAAAACCAAAGCCATGGTTGAGGAGCTGCTTAAGGAGTTTGATAACGTATGCACACTAAGGGTTAGGATGCCGATCTCCTCTGATCTCAACAACCCGAGAAACTTCATCACCAAGATTTCCCGGTACAGCAAAGTAGTGAACATCCCAAACAGCATGACCGTGCTGGACGAGCTTCTTCCAATCTCGATAGAGATGGCGAAAAGAAACCTGAAAGGGATTTGGAACTTCACCAACCCCGGTGTTGTGAGTCACAATGAGGTCCTGGAGATGTACAGAGACTACATCGACTCTGACTTCAAATGGGCGAACTTCACACTAGAGGAGCAAGCCAAAGTCATCGTGGCTCCAAGAAGCAACAACGAGCTGGACGCATCTAAGCTCAAGAAAGAGTTCCCTGAATTACTCTCAATCAAGGAGTCTCTGATCAAATATGCATTTGAGCCCAACAAGAGAACTTGA
Protein:  
MASSYTPKNILITGAAGFIASHVANRLIRTYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIASADLVNYLLITERIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFMLLAMRGKVLPIHGDGSNVRSYLYCEDVAEAFEVILHKGEVGHVYNIGTKKERRVNDVAQDICKLFNVDPEANIKFVENRPFNDQRYFLDDEKLKILGWSERTTWEEGLKKTMEWYTQNPDWWGDVSGALLPHPRMLVMPGGRHFDGSEENSGAVALSGNSSQSQMVVPTPRSSGSTQNPSLKFLIYGKTGWIGGLLGQICEKQGIAFEYGKGRLEDRSSLLQDILTVKPTHVFNAAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHSLLLMNFATGCIFEYDENHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEFDNVCTLRVRMPISSDLNNPRNFITKISRYSKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEVLEMYRDYIDSDFKWANFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKYAFEPNKRT